Pathology and Diagnostics News

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  • December 2021 Pathology BETA Preview Release

    In line with the NHS Digital Pathology and Diagnostics Product Roadmap we are pleased to announce a BETA preview release of revised content has now been published in human-readable form on our collaboration space. 

     An overview presentation of the release is available to view here 

     This release contains 4,220 SNOMED CT concepts: 

    • 3,866 reportable observable entities 
    • 354 requestable procedure codes 

    Significant changes in this release: 

    • Replacement of the ‘Specimen’ SNOMED attribute with ‘inheres_in’ and ‘direct_site’ attributes for 3,417 reportable concepts   
    • Lists of terms in tab-separated (TSV) file format are no longer included in the review pack 

     Separately to this Beta release we are also publishing a number of draft concepts for review on the NHS Digital Kahootz collaboration site.   

    • ~50 draft candidate concepts representing the specialist discipline of Cellular Pathology: Cytology 

    Please note these draft concepts have not been assigned SNOMED Concept IDs and are intended for the purpose of reviewing the term descriptions and modelling only: 

    The Human readable release can be found here and the Cellular Pathology draft candidate code list can be found here

     Please use the links below to access the latest supporting documentation: 

     Please provide feedback via:  

    By Chris Hood 12 months ago

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  • UK SNOMED CT Clinical Edition, RF2 - new releases

    New releases of ‘UK SNOMED CT Clinical Edition, RF2’ items are now available:

    UK SNOMED CT Clinical Edition, RF2: Delta

    UK SNOMED CT Clinical Edition, RF2: Full, Snapshot & Delta

    The format of the SNOMED CT UK Editions has changed

    Read more on the format change and other important SNOMED CT UK Edition information on the SNOMED CT Releases: Important Notices & Known Issues page on Delen.

    Read the release notes and supporting documentation on the SNOMED CT UK Clinical Extension Release Documentation page on Delen.

    For TRUD issues, email information.standards@nhs.net or call 0300 303 4777.

    Regards,

    By Chris Hood 12 months ago

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  • UK SNOMED CT Clinical Edition, RF2 - new releases

    New releases of ‘UK SNOMED CT Clinical Edition, RF2’ items are now available:

    UK SNOMED CT Clinical Edition, RF2: Delta

    UK SNOMED CT Clinical Edition, RF2: Full, Snapshot & Delta

    The format of the SNOMED CT UK Editions has changed

    Read more on the format change and other important SNOMED CT UK Edition information on the SNOMED CT Releases: Important Notices & Known Issues page on Delen.

    Read the release notes and supporting documentation on the SNOMED CT UK Clinical Extension Release Documentation page on Delen.

    For TRUD issues, email information.standards@nhs.net or call 0300 303 4777.

    Regards,

    Information Standards Service Desk
    NHS Digital

    By Chris Hood 1 year ago

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  • UTL v1.0.0 released

    In line with the NHS Digital Pathology and Diagnostics Product Roadmap we are pleased to announce that version 1.0.0 of the Unified Test List (UTL) has now been published in human-readable form on our collaboration space.

    Following approval of the DAPB4017 Pathology Test and Results Information Standard by the Data Alliance Partnership Board in August we are pleased to announce that this version of the Unified Test List has also been published as part of the SNOMED CT UK Clinical Edition 32.5.0 as the SNOMED CT UK Pathology Extension.

    UTL is now formally part of SNOMED CT UK with a status of ‘Draft For Trial Use’ as defined in the IReS Terminology Product Development Lifecycle (external PDF) and future Live and Beta releases of the UTL will reflect versioning aligned to the appropriate SNOMED CT UK Clinical Edition.

    This release contains 4,220 SNOMED CT concepts:

    • 3866 reportable observable entities
    • 354 requestable procedure codes
    • Replacements for all legacy Pathology Bounded Code List concepts
    • Full coverage for Blood Sciences and Microbiology specialisms

    The Machine readable release can be found here.

    The Human readable release can be found here.  

    An overview presentation of the release content is available to view here   

    Please note, the columns for the attributes including substance, property and specimen are included in the release files purely for information. Please use the links below to access the updated supporting documentation:

     Please provide feedback via: 

    By Chris Hood 1 year ago

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  • UK SNOMED CT Clinical Edition, RF2 - new releases

    New releases of ‘UK SNOMED CT Clinical Edition, RF2’ items are now available:

    The format of the SNOMED CT UK Editions has changed.

    Read more on the format change and other important SNOMED CT UK Edition information on the SNOMED CT Releases: Important Notices & Known Issues page on Delen.

    Read the release notes and supporting documentation on the SNOMED CT UK Clinical Extension Release Documentation page on Delen.

    For TRUD issues, email information.standards@nhs.net or call 0300 303 4777.

    Regards,

    Information Standards Service Desk
    NHS Digital

    By Chris Hood 1 year ago

    Read this article

  • NHS Digital Receive Approval for the Pathology Information Standards - A New Vision for Patient-Centred HealthCare

    The Pathology Team at NHS Digital are delighted to announce the approval of the Pathology Information Standards by the Data Alliance Partnership Board (DAPB).  This is a positive step towards the future of pathology with an overall objective to improve patient care. It will enable Clinicians to access pathology tests and results across health and care, receiving the right information at the right time and right place, supporting improved clinical decision making and patient safety. 

    The Pathology Information Standards Notice and associated documents can be found here.

    As part of NHS England CCIO7 workstreams, NHS Digital are delivering the ability to share pathology results across health and care.  Following The Future of Healthcare Vision and the NHS Digital standards framework response, NHS Digital were commissioned by NHSX to define Information Standards aligned with clinical, commissioning and patient needs to support the sharing of pathology tests and results across care settings and organisational boundaries.   

    The need to accelerate the development of a standardised universal test list for Pathology services formed part of the recommendations made by Professor Sir Mike Richards in a wider diagnostic review commissioned by NHS Chief Executive Sir Simon Stevens in October 2020. 

    To meet future NHS needs for interoperability and secondary care use within the Pathology domain, three inter-related specifications have been identified based on relevant component parts of international standards, namely: 

    Unified Test List (UTL) – a national catalogue of Pathology test requests and results to replace the Pathology Bounded Code List (PBCL), based on SNOMED CT 

    Units of Measure (UoM) – an unambiguous representation of commonly used units, aligned with the UTL, based on Unified Code for Units of Measure (UCUM) 

    Pathology Message Specification – for interoperable data exchange of Pathology information, based on Health Level 7 (HL7) Fast Healthcare Interoperability Resources (FHIR)   

    Together, as an information standard, they enable the future communication and exchange of tests, results, quantities, and units used in the Pathology domain across the NHS. The full standard is intended for use by GP, Labs, secondary care and social care (where applicable), used in GP systems, LIMS, Order Comms, pathology middleware, & clinical research. 

    Pathology Standards Component Parts 

    This diagram shows that the three Pathology standards are inter-related. The FHIR message consists of the SNOMED CT clinical coding describing the pathology test request or result, alongside the test result value and unit of measure describing how the value should be interpreted by the recipient. 

    ISN

    We would like to thank everyone who has contributed to the development of the Pathology Information Standards, both internally, within NHS Digital, and externally, without whose input and guidance the approval of our standards would not have been possible.  Although our contributors are too numerous to mention, we would like to give special thanks to our strategic partners as part of the wider NHS family, our Governance Boards, the PRSB, the Royal Colleges and all our stakeholders, including National User Group members, who have lent us their time and subject matter expertise.

    Dr Michael Osborn BSC MBBS MRCS FRCPath

    President of the Royal College of Pathologists

    Consultant Histopathologist for North West London Pathology at Imperial College Healthcare NHS Trust, London

    “I’d like to thank the Pathology Team at NHS Digital for their excellent work, which has culminated in the approval of the Pathology Information Standards. This is an important step towards the development of a standardised universal test list for pathology services which will benefit patients care and contribute to the promotion of pathology.”

     

    Prof. Jo Martin, MA PhD RCPathME FIBMS(Hon) FRCPI (Hon) FRCPath

    National Specialty Advisor for Pathology NHSE/I

    Professor of Pathology, Queen Mary University of London

    “I am really pleased with the work the Pathology Team at NHS Digital has done in helping make the vision of an interconnected system a reality.  I am excited to see the progress towards improving patient care for the future.”

     

    Dr Laszlo Igali

    Consultant Histopathologist, Norfolk and Norwich University Hospital

    Member of the Pathology Informatics Group at the Royal College of Pathologists

    Co-Chair of the Pathology Informatics National User Group

    “This is a very positive step in the development of digital pathology improvements and the standardisation of digital pathology data.”

     

    Ian Townend

    Chief Architect, NHS-X

    “I’d like to thank the Pathology Team for all their hard work in the development of these core standards for the pathology area.  This work closely aligns with NHSX’s top priorities around interoperability, information standards and supporting the use of new technologies. I'm looking forward to starting to see implementation across health and social care.” 

     

    Gill Foley

    Data and Clinical Content Standards Lead, NHS-X

    "It's great to see the Pathology Standards have been approved by the Data Alliance Partnership Board. This standard provides the much-needed foundation for sharing pathology tests and results nationwide.”

     

     The team can be contacted via email at pathologyanddiagnostics@nhs.net

    More information can be found at the Pathology & Diagnostics Information Standards Collaboration Space

    We also encourage interested parties to join our online collaboration space and take part in the regular Pathology Informatics National User Group (PINUG) meetings. 

    The Pathology Team at NHS Digital are facilitating an all-day virtual Supplier Forum event on Thursday, 23rd September 2021, which will comprise a series of interactive workshops.  The aim of this Forum is to increase supplier engagement and discuss the challenges relating to implementation following the approval of the Pathology Information Standards.  To register your interest in attending this Forum, please contact the Pathology Team at pathologyanddiagnostics@nhs.net.

    By Chris Hood 1 year ago

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  • UTL release v0.9.0

    Dear all,

    In line with the NHS Digital Pathology and Diagnostics Product Roadmap we are pleased to announce that version 0.9.0 of the Unified Test List has now been published in human-readable form on our collaboration space.

    This release includes updates to the following domains:

    • Microbiology Antigen tests (48)
    • Microbiology Culture tests (203)
    • Gram stain (1) - for consultation
    • Quality Improvements across all domains (1300+)

    UTL now has 4232 SNOMED CT concepts in total split into 3878 Reportable and 354 Requestable.

    The Human readable release can be found here. A Machine-readable release will be published week commencing 16th August.  Both versions will contain the same content.

    An overview presentation of the release content is available to view here.

    Please note, the columns for the attributes including substance, property and specimen are included in the release files purely for information. Please use the links below to access the updated supporting documentation:

     Please provide feedback via: 

    As a Pathology and Diagnostics stakeholder, you will have received an invitation for a kick-off meeting and workshop, on 13th August and 25th August respectively, where the team will provide an overview of the release and aim to address any feedback received.

    Kind regards,

    National Pathology and Diagnostics

    NHS Digital

    By Chris Hood 1 year ago

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  • UK SNOMED CT Clinical Edition, RF2 - new releases

    New releases of ‘UK SNOMED CT Clinical Edition, RF2’ items are now available:

    The format of the SNOMED CT UK Editions has changed.

    Read more on the format change and other important SNOMED CT UK Edition information on the SNOMED CT: Important Notices & Known Issues page on Delen.

    Legacy-format releases of the SNOMED CT UK Editions are now released under the UK SNOMED CT test releases item on TRUD. The final release using this format will be on 14 July 2021.

    Read the SNOMED CT UK Clinical Extension Release Documentation on Delen.

    For TRUD issues, email information.standards@nhs.net or telephone 0300 303 4777 weekdays between 9:00am and 5:00pm.

    Regards,

    Information Standards Service Desk
    NHS Digital

    By Chris Hood 1 year ago

    Read this article

  • UTL v0.8.0 released

    In line with the NHS Digital Pathology and Diagnostics Product Roadmap we are pleased to announce that version 0.8.0 of the Unified Test List has now been published in human-readable form on our collaboration space.

    This release includes updates to the following domains:

    • Chemical pathology
    • Haematology
    • Microbiology

    The Human readable release now has 3985 SNOMED CT concepts in total and the Machine readable release has 3162.

    An overview presentation of the release content is available to view here .

    The human readable release is provided in three parts:

    • PBCL (Pathology Bounded Code List) request codes and Covid-19 request codes

    Panels/groups and high-volume single test requests – 225 concepts

    Screening test requests – 131 concepts

    • Outstanding PBCL reportable codes and Covid-19 reportable codes (included in the main Report code set file) – 133 concepts.
    • Concepts representing the “qualitative result of presence” including Covid-19 codes – 447 concepts (including updates to codes published in 0.7.0)

    The concepts representing the “qualitative interpretation of presence” was flagged as an area that may be ambiguous in use.

    To establish a consensus from users and stakeholders we have published this terminology pattern as Qualitative Result alongside the main content but separate from the core terminology recorded in the machine-readable form, to solicit further beta feedback on the preferred pattern for these concepts.

    The columns for the attributes including substance, property and specimen are included in the release files purely for information. They will ultimately be used to formally classify the SNOMED content using the observable entity concept model, where the attributes and corresponding values will be used to create the SNOMED CT machine readable description logic definitions.

    Please use the links below to access the updated supporting documentation:

     Please provide feedback via: 

    As a Pathology and Diagnostics stakeholder, you will have received an invitation for a kick-off meeting and workshop, on 28th May and 9th June respectively, where the team will provide an overview of the release and aim to address any feedback received.

    By Chris Hood 1 year ago

    Read this article

  • UK SNOMED CT Clinical Edition, RF2 - new releases

    New releases of ‘UK SNOMED CT Clinical Edition, RF2’ items are now available:

    The format of the SNOMED CT UK Editions has changed.

    Read more on the format change and other important SNOMED CT UK Edition information on the SNOMED CT: Important Notices & Known Issues page on Delen.

    Legacy-format releases of the SNOMED CT UK Editions are now released under the UK SNOMED CT test releases item on TRUD. The final release using this format will be on 14 July 2021.

    Read the SNOMED CT UK Clinical Extension Release Documentation on Delen.

    For TRUD issues, email information.standards@nhs.net or telephone 0300 303 4777 weekdays between 9:00am and 5:00pm.

    Regards,

    Information Standards Service Desk
    NHS Digital

    By Chris Hood 1 year ago

    Read this article

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